feat: Remove outdated testing documentation and add comprehensive development and feature guides

- Deleted `TESTING_SETUP.md` and `TEST_UPDATES_SUMMARY.md` as they were outdated. - Introduced `CHANGELOG.md` to document notable changes and version history. - Added `DEVELOPMENT.md` for detailed development setup, testing framework, and debugging guidance. - Created `FEATURES.md` to outline core features and functionalities of TheChart. - Established `README.md` as a centralized documentation index for users and developers.
2025-07-31 11:39:12 -07:00
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+# Changelog
+
+All notable changes to TheChart project are documented in this file.
+
+The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/),
+and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
+
+## [1.3.4] - 2025-07-31
+
+### 📚 Documentation Overhaul
+- **BREAKING**: Consolidated scattered documentation into organized structure
+- **Added**: Comprehensive `docs/FEATURES.md` with complete feature documentation
+- **Added**: Detailed `docs/DEVELOPMENT.md` with testing and development guide
+- **Updated**: Streamlined `README.md` with quick-start focus and navigation
+- **Removed**: 10 redundant/outdated markdown files
+- **Improved**: Clear separation between user and developer documentation
+
+### 🏗️ Documentation Structure
+```
+docs/
+├── FEATURES.md     # Complete feature guide (new)
+├── DEVELOPMENT.md  # Development & testing guide (new)
+└── CHANGELOG.md    # This changelog (new)
+
+README.md          # Streamlined quick-start guide (updated)
+```
+
+## [1.3.3] - Previous Releases
+
+### 🏥 Modular Medicine System
+- **Added**: Dynamic medicine management system
+- **Added**: JSON-based medicine configuration (`medicines.json`)
+- **Added**: Medicine management UI (`Tools` → `Manage Medicines...`)
+- **Added**: Configurable medicine properties (colors, doses, names)
+- **Added**: Automatic UI updates when medicines change
+- **Added**: Backward compatibility with existing data
+
+### 💊 Advanced Dose Tracking System
+- **Added**: Precise timestamp recording for medicine doses
+- **Added**: Multiple daily dose support for same medicine
+- **Added**: Comprehensive dose tracking interface in edit windows
+- **Added**: Quick-dose buttons for common amounts
+- **Added**: Real-time dose display and feedback
+- **Added**: Historical dose data persistence in CSV
+- **Improved**: Dose format parsing with robust error handling
+
+#### Punch Button Redesign
+- **Moved**: Dose tracking from main input to edit window
+- **Added**: Individual dose entry fields per medicine
+- **Added**: "Take [Medicine]" buttons with immediate recording
+- **Added**: Editable dose display areas with history
+- **Improved**: User experience with centralized dose management
+
+### 📊 Enhanced Graph Visualization
+- **Added**: Medicine dose bar charts with distinct colors
+- **Added**: Interactive toggle controls for symptoms and medicines
+- **Added**: Enhanced legend with multi-column layout
+- **Added**: Average dosage calculations and displays
+- **Added**: Professional styling with transparency and shadows
+- **Improved**: Graph layout with dynamic positioning
+
+#### Medicine Dose Plotting
+- **Added**: Visual representation of daily medication intake
+- **Added**: Scaled dose display (mg/10) for chart compatibility
+- **Added**: Color-coded bars for each medicine
+- **Added**: Semi-transparent rendering to preserve symptom visibility
+- **Fixed**: Dose calculation logic for complex timestamp formats
+
+#### Legend Enhancements
+- **Added**: Multi-column legend layout (2 columns)
+- **Added**: Average dosage information per medicine
+- **Added**: Tracking status for medicines without current doses
+- **Added**: Frame, shadow, and transparency effects
+- **Improved**: Space utilization and readability
+
+### 🧪 Comprehensive Testing Framework
+- **Added**: Professional testing infrastructure with pytest
+- **Added**: 93% code coverage across 112 tests
+- **Added**: Coverage reporting (HTML, XML, terminal)
+- **Added**: Pre-commit testing hooks
+- **Added**: Comprehensive dose calculation testing
+- **Added**: UI component testing with mocking
+- **Added**: Medicine plotting and legend testing
+
+#### Test Infrastructure
+- **Added**: `tests/conftest.py` with shared fixtures
+- **Added**: Sample data generators for realistic testing
+- **Added**: Mock loggers and temporary file management
+- **Added**: Environment variable mocking
+
+#### Pre-commit Testing
+- **Added**: Automated testing before commits
+- **Added**: Core functionality validation (3 essential tests)
+- **Added**: Commit blocking on test failures
+- **Configured**: `.pre-commit-config.yaml` with testing hooks
+
+### 🏗️ Technical Architecture Improvements
+- **Added**: Modular component architecture
+- **Added**: MedicineManager and PathologyManager classes
+- **Added**: Dynamic UI generation based on configuration
+- **Improved**: Separation of concerns across modules
+- **Enhanced**: Error handling and logging throughout
+
+### 📈 Data Management Enhancements
+- **Added**: Automatic data migration and backup system
+- **Added**: Dynamic CSV column management
+- **Added**: Robust dose string parsing
+- **Improved**: Data validation and error handling
+- **Enhanced**: Backward compatibility preservation
+
+### 🔧 Development Tools & Workflow
+- **Added**: uv integration for fast package management
+- **Added**: Comprehensive Makefile with development commands
+- **Added**: Docker support with multi-platform builds
+- **Added**: Pre-commit hooks for code quality
+- **Added**: Ruff for fast Python formatting and linting
+- **Improved**: Virtual environment management
+
+### 🚀 Deployment & Distribution
+- **Added**: PyInstaller integration for standalone executables
+- **Added**: Linux desktop integration
+- **Added**: Automatic file installation and desktop entries
+- **Added**: Docker containerization support
+- **Improved**: Build and deployment automation
+
+## Technical Details
+
+### Dependencies
+- **Runtime**: Python 3.13+, matplotlib, pandas, tkinter, colorlog
+- **Development**: pytest, pytest-cov, ruff, pre-commit, pyinstaller
+- **Package Management**: uv (Rust-based, 10-100x faster than pip/Poetry)
+
+### Architecture
+- **Frontend**: Tkinter-based GUI with dynamic component generation
+- **Backend**: Pandas for data manipulation, Matplotlib for visualization
+- **Storage**: CSV-based with JSON configuration files
+- **Testing**: pytest with comprehensive mocking and coverage
+
+### File Structure
+```
+src/                    # Main application code
+├── main.py            # Application entry point
+├── ui_manager.py      # User interface management
+├── data_manager.py    # CSV operations and data persistence
+├── graph_manager.py   # Visualization and plotting
+├── medicine_manager.py # Medicine system management
+└── pathology_manager.py # Symptom tracking
+
+tests/                 # Comprehensive test suite (112 tests, 93% coverage)
+docs/                  # Organized documentation
+├── FEATURES.md        # Complete feature documentation
+├── DEVELOPMENT.md     # Development and testing guide
+└── CHANGELOG.md       # This changelog
+
+Configuration Files:
+├── medicines.json     # Medicine definitions (auto-generated)
+├── pathologies.json   # Symptom categories (auto-generated)
+├── pyproject.toml     # Project configuration
+└── uv.lock           # Dependency lock file
+```
+
+## Migration Notes
+
+### From Previous Versions
+- **Data Compatibility**: All existing CSV data continues to work
+- **Automatic Migration**: Data structure updates handled automatically
+- **Backup Creation**: Automatic backups before major changes
+- **No Data Loss**: Existing functionality preserved during updates
+
+### Configuration Migration
+- **Medicine System**: Hard-coded medicines converted to JSON configuration
+- **UI Updates**: Interface automatically adapts to new medicine definitions
+- **Graph Integration**: Visualization system updated for dynamic medicines
+
+## Future Roadmap
+
+### Planned Features (v2.0)
+- **Mobile App**: Companion mobile application for dose tracking
+- **Cloud Sync**: Multi-device data synchronization
+- **Advanced Analytics**: Machine learning-based trend analysis
+- **Reminder System**: Intelligent medication reminders
+- **Doctor Integration**: Healthcare provider report generation
+
+### Platform Expansion
+- **macOS Support**: Native macOS application
+- **Windows Support**: Windows executable and installer
+- **Web Interface**: Browser-based version for universal access
+
+### API Development
+- **REST API**: External system integration
+- **Plugin Architecture**: Third-party extension support
+- **Data Export**: Multiple format support (JSON, XML, etc.)
+
+---
+
+## Contributing
+
+This project follows semantic versioning and maintains comprehensive documentation.
+For development guidelines, see [docs/DEVELOPMENT.md](docs/DEVELOPMENT.md).
+For feature information, see [docs/FEATURES.md](docs/FEATURES.md).