refactor: Remove deprecated scripts and clean up UIManager methods for improved maintainability

.gitkeep

@@ -0,0 +1 @@
+# placeholder

scripts/README.md.backup

@@ -1,110 +0,0 @@
-# TheChart Scripts Directory
-
-This directory contains interactive demonstrations and utility scripts for TheChart application.
-
-## Scripts Overview
-
-### Testing Scripts
-
-#### `run_tests.py`
-Main test runner for the application.
-```bash
-cd /home/will/Code/thechart
-.venv/bin/python scripts/run_tests.py
-```
-
-#### `integration_test.py`
-Comprehensive integration test for the export system.
-- Tests all export formats (JSON, XML, PDF)
-- Validates data integrity and file creation
-- No GUI dependencies - safe for automated testing
-
-```bash
-cd /home/will/Code/thechart
-.venv/bin/python scripts/integration_test.py
-```
-
-### Feature Testing Scripts
-
-#### `test_note_saving.py`
-Tests note saving and retrieval functionality.
-- Validates note persistence in CSV files
-- Tests special characters and formatting
-
-#### `test_update_entry.py`
-Tests entry update functionality.
-- Validates data modification operations
-- Tests date validation and duplicate handling
-
-#### `test_keyboard_shortcuts.py`
-Tests keyboard shortcut functionality.
-- Validates keyboard event handling
-- Tests shortcut combinations and responses
-
-### Interactive Demonstrations
-
-#### `test_menu_theming.py`
-Interactive demonstration of menu theming functionality.
-- Live theme switching demonstration
-- Visual display of theme colors
-- Real-time menu color updates
-
-```bash
-cd /home/will/Code/thechart
-.venv/bin/python scripts/test_menu_theming.py
-```
-
-## Usage
-
-All scripts should be run from the project root directory using the virtual environment:
-
-```bash
-cd /home/will/Code/thechart
-source .venv/bin/activate.fish  # For fish shell
-# OR
-source .venv/bin/activate       # For bash/zsh
-
-python scripts/<script_name>.py
-```
-
-## Test Organization
-
-### Unit Tests
-Located in `/tests/` directory:
-- `test_theme_manager.py` - Theme manager functionality tests
-- `test_data_manager.py` - Data management tests
-- `test_ui_manager.py` - UI component tests
-- `test_graph_manager.py` - Graph functionality tests
-- And more...
-
-Run unit tests with:
-```bash
-cd /home/will/Code/thechart
-.venv/bin/python -m pytest tests/
-```
-
-### Integration Tests
-Located in `/scripts/` directory:
-- `integration_test.py` - Export system integration test
-- Feature-specific test scripts
-
-### Interactive Demos
-Located in `/scripts/` directory:
-- `test_menu_theming.py` - Menu theming demonstration
-
-## Test Data
-
-- Integration tests create temporary export files in `integration_test_exports/` (auto-cleaned)
-- Test scripts use the main `thechart_data.csv` file unless specified otherwise
-- No test data is committed to the repository
-
-## Development
-
-When adding new scripts:
-1. Place them in this directory
-2. Use the standard shebang: `#!/usr/bin/env python3`
-3. Add proper docstrings and error handling
-4. Update this README with script documentation
-5. Follow the project's linting and formatting standards
-6. For unit tests, place them in `/tests/` directory
-7. For integration tests or demos, place them in `/scripts/` directory

scripts/deprecated_test_keyboard_shortcuts.py

@@ -1,27 +0,0 @@
-#!/usr/bin/env python3
-"""
-⚠️  DEPRECATED SCRIPT ⚠️
-
-This script has been consolidated into the new unified test suite.
-Please use the new testing structure instead:
-
-For theme testing:
-    .venv/bin/python scripts/quick_test.py theme
-
-For integration testing:
-    .venv/bin/python scripts/quick_test.py integration
-
-For all tests:
-    .venv/bin/python scripts/run_tests.py
-
-See TESTING_MIGRATION.md for full details.
-"""
-
-import sys
-
-print("⚠️  This script is deprecated. Please use the new test structure.")
-print("See TESTING_MIGRATION.md for migration instructions.")
-sys.exit(1)
-
-# Original script content below (preserved for reference):
-# """ + content[content.find('"""'):] if '"""' in content else content + """

scripts/deprecated_test_menu_theming.py

@@ -1,27 +0,0 @@
-#!/usr/bin/env python3
-"""
-⚠️  DEPRECATED SCRIPT ⚠️
-
-This script has been consolidated into the new unified test suite.
-Please use the new testing structure instead:
-
-For theme testing:
-    .venv/bin/python scripts/quick_test.py theme
-
-For integration testing:
-    .venv/bin/python scripts/quick_test.py integration
-
-For all tests:
-    .venv/bin/python scripts/run_tests.py
-
-See TESTING_MIGRATION.md for full details.
-"""
-
-import sys
-
-print("⚠️  This script is deprecated. Please use the new test structure.")
-print("See TESTING_MIGRATION.md for migration instructions.")
-sys.exit(1)
-
-# Original script content below (preserved for reference):
-# """ + content[content.find('"""'):] if '"""' in content else content + """

scripts/deprecated_test_note_saving.py

@@ -1,27 +0,0 @@
-#!/usr/bin/env python3
-"""
-⚠️  DEPRECATED SCRIPT ⚠️
-
-This script has been consolidated into the new unified test suite.
-Please use the new testing structure instead:
-
-For theme testing:
-    .venv/bin/python scripts/quick_test.py theme
-
-For integration testing:
-    .venv/bin/python scripts/quick_test.py integration
-
-For all tests:
-    .venv/bin/python scripts/run_tests.py
-
-See TESTING_MIGRATION.md for full details.
-"""
-
-import sys
-
-print("⚠️  This script is deprecated. Please use the new test structure.")
-print("See TESTING_MIGRATION.md for migration instructions.")
-sys.exit(1)
-
-# Original script content below (preserved for reference):
-# """ + content[content.find('"""'):] if '"""' in content else content + """

scripts/deprecated_test_update_entry.py

@@ -1,27 +0,0 @@
-#!/usr/bin/env python3
-"""
-⚠️  DEPRECATED SCRIPT ⚠️
-
-This script has been consolidated into the new unified test suite.
-Please use the new testing structure instead:
-
-For theme testing:
-    .venv/bin/python scripts/quick_test.py theme
-
-For integration testing:
-    .venv/bin/python scripts/quick_test.py integration
-
-For all tests:
-    .venv/bin/python scripts/run_tests.py
-
-See TESTING_MIGRATION.md for full details.
-"""
-
-import sys
-
-print("⚠️  This script is deprecated. Please use the new test structure.")
-print("See TESTING_MIGRATION.md for migration instructions.")
-sys.exit(1)
-
-# Original script content below (preserved for reference):
-# """ + content[content.find('"""'):] if '"""' in content else content + """

src/ui_manager.py

@@ -5,7 +5,7 @@ import sys
 import tkinter as tk
 from collections.abc import Callable
 from datetime import datetime
-from tkinter import messagebox, ttk
+from tkinter import ttk
 from typing import Any
 
 import pandas as pd
@@ -1564,10 +1564,6 @@ class UIManager:
 
         return vars_dict
 
-    def _get_quick_doses(self, medicine_key: str) -> list[str]:
-        """Get common dose amounts for quick selection."""
-        return self.medicine_manager.get_quick_doses(medicine_key)
-
     def _populate_dose_history(self, text_widget: tk.Text, doses_str: str) -> None:
         """Populate dose history text widget with formatted dose data."""
         text_widget.configure(state="normal")
@@ -1606,75 +1602,6 @@ class UIManager:
 
         # Always keep text widget enabled for user editing
 
-    def _take_dose(
-        self,
-        med_name: str,
-        entry_var: tk.StringVar,
-        med_key: str,
-        vars_dict: dict[str, Any],
-    ) -> None:
-        """Handle taking a dose with feedback and state management."""
-        dose = entry_var.get().strip()
-
-        # Get the dose text widget - this is what the save function reads from
-        dose_text_widget = vars_dict.get(f"{med_key}_doses_text")
-        if not dose_text_widget:
-            self.logger.error(f"Dose text widget not found for {med_key}")
-            return
-
-        # Find the parent edit window
-        parent_window = dose_text_widget.winfo_toplevel()
-
-        if not dose:
-            messagebox.showerror(
-                "Error",
-                f"Please enter a dose amount for {med_name}",
-                parent=parent_window,
-            )
-            return
-
-        # Get current time and timestamp
-        now = datetime.now()
-        time_str = now.strftime("%I:%M %p")
-
-        # Ensure text widget is enabled
-        dose_text_widget.configure(state="normal")
-
-        # Get current content from the text widget
-        current_content = dose_text_widget.get(1.0, tk.END).strip()
-        self.logger.debug(f"Current content before adding dose: '{current_content}'")
-
-        # Create new dose entry in the display format
-        new_dose_line = f"• {time_str} - {dose}"
-        self.logger.debug(f"New dose line: '{new_dose_line}'")
-
-        # Add the new dose to the text widget
-        if current_content == "No doses recorded today" or not current_content:
-            dose_text_widget.delete(1.0, tk.END)
-            dose_text_widget.insert(1.0, new_dose_line)
-            self.logger.debug("Added first dose")
-        else:
-            # Append to existing content with proper formatting
-            updated_content = current_content + f"\n{new_dose_line}"
-            self.logger.debug(f"Updated content: '{updated_content}'")
-            dose_text_widget.delete(1.0, tk.END)
-            dose_text_widget.insert(1.0, updated_content)
-            self.logger.debug("Added subsequent dose")
-
-        # Verify what's actually in the widget after insertion
-        final_content = dose_text_widget.get(1.0, tk.END).strip()
-        self.logger.debug(f"Final content in widget: '{final_content}'")
-
-        # Clear entry field
-        entry_var.set("")
-
-        # Success feedback
-        messagebox.showinfo(
-            "Dose Recorded",
-            f"{med_name} dose of {dose} recorded at {time_str}",
-            parent=parent_window,
-        )
-
     def _add_edit_buttons(
         self,
         parent: ttk.Frame,