""" Fixtures and configuration for pytest tests. """ import os import tempfile import pytest import pandas as pd from unittest.mock import Mock import logging @pytest.fixture def temp_csv_file(): """Create a temporary CSV file for testing.""" fd, path = tempfile.mkstemp(suffix='.csv') os.close(fd) yield path # Cleanup if os.path.exists(path): os.unlink(path) @pytest.fixture def sample_data(): """Sample data for testing.""" return [ ["2024-01-01", 3, 2, 4, 3, 1, "", 0, "", 2, "", 1, "", 0, "", "Test note 1"], ["2024-01-02", 2, 3, 3, 4, 1, "", 1, "", 2, "", 0, "", 1, "", "Test note 2"], ["2024-01-03", 4, 1, 5, 2, 0, "", 0, "", 1, "", 1, "", 0, "", ""], ] @pytest.fixture def sample_dataframe(): """Sample DataFrame for testing.""" return pd.DataFrame({ 'date': ['2024-01-01', '2024-01-02', '2024-01-03'], 'depression': [3, 2, 4], 'anxiety': [2, 3, 1], 'sleep': [4, 3, 5], 'appetite': [3, 4, 2], 'bupropion': [1, 1, 0], 'bupropion_doses': ['2024-01-01 08:00:00:150mg', '2024-01-02 08:00:00:300mg', ''], 'hydroxyzine': [0, 1, 0], 'hydroxyzine_doses': ['', '2024-01-02 20:00:00:25mg', ''], 'gabapentin': [2, 2, 1], 'gabapentin_doses': ['2024-01-01 12:00:00:100mg|2024-01-01 20:00:00:100mg', '2024-01-02 12:00:00:100mg|2024-01-02 20:00:00:100mg', '2024-01-03 12:00:00:100mg'], 'propranolol': [1, 0, 1], 'propranolol_doses': ['2024-01-01 12:00:00:10mg', '', '2024-01-03 12:00:00:20mg'], 'quetiapine': [0, 1, 0], 'quetiapine_doses': ['', '2024-01-02 22:00:00:50mg', ''], 'note': ['Test note 1', 'Test note 2', ''] }) @pytest.fixture def mock_logger(): """Mock logger for testing.""" return Mock(spec=logging.Logger) @pytest.fixture def temp_log_dir(): """Create a temporary directory for log files.""" with tempfile.TemporaryDirectory() as temp_dir: yield temp_dir @pytest.fixture def mock_env_vars(monkeypatch): """Mock environment variables.""" monkeypatch.setenv("LOG_LEVEL", "DEBUG") monkeypatch.setenv("LOG_PATH", "/tmp/test_logs") monkeypatch.setenv("LOG_CLEAR", "False") @pytest.fixture def sample_dose_data(): """Sample dose data for testing dose calculation.""" return { 'standard_format': '2025-07-28 18:59:45:150mg|2025-07-28 19:34:19:75mg', # Should sum to 225 'with_bullets': '• • • • 2025-07-30 07:50:00:300', # Should be 300 'decimal_doses': '2025-07-28 18:59:45:12.5mg|2025-07-28 19:34:19:7.5mg', # Should sum to 20 'no_timestamp': '100mg|50mg', # Should sum to 150 'mixed_format': '• 2025-07-30 22:50:00:10|75mg', # Should sum to 85 'empty_string': '', # Should be 0 'nan_value': 'nan', # Should be 0 'no_units': '2025-07-28 18:59:45:10|2025-07-28 19:34:19:5', # Should sum to 15 }